Schedule Reading Homework
schedule & assignments    

 

about Dr. B.

course description

Week 1 – Jan. 17/19 Tutorials I and II Th) bring to class speculations of how metals can affect biological chemistry

worksheets

discussion questions

Week 2 - Jan. 24/26 

C2 Bioavailability & Biogeochemistry,

T) your questions on tutorial I

Th) Prepare Discussion Questions for C2

Web links

periodic table

Week 3 –Jan31, Feb2

C3 Metal Ions and Protein Interactions

C4-Metal Cofactor

Worksheet #1 on Metal-Protein Interactions

Bring computer and a .pdb file of your choice to learn how to use protein structure viewers. .

homepage

Week 4 – Feb. 7/9

 

C5 Metal Ion Transport and Storage

Worksheet #2 on Metal Tranport .

 

Week 5 – Feb. 14/16

 

C6: Biomineralization (T)

C8 Metal Ion Containing Biological Systems

 

C8 section presentations (as assigned)

 

Week 6 – Feb. 21/23

 

C8 Metal Ion Containing Biological Systems

C10.1 Metals in Electron Transfer Proteins

Prepare Discussion Questions on ET

 

 

Week 7 – Feb. 28, Mar. 2

C10.1 Metals in Electron Transfer Proteins

 

  Week 8 – Mar. 7/9 SPRING BREAK!  
  Week 9 – Mar. 14/16

C10.3 ET in Respiration and C10.4 ET in Photosynthesis

Physical Methods: EXAFS, XANES, EPR

Prepare Discussion Questions on Respiration and Photosynthesis

Wikipedia: EXAFS, XANES, EPR and Resonance Raman

  Week 10 – Mar. 20/22

Physical Methods: EPR and Resonance Raman (rR) MCD, DFT, Mossbauer

C11.1 Dioxygen Chemistry and Toxicity

Wikipedia: MCD, DFT, Mossbauer

  Week 11 –Mar. 27/29

C11.2-11.3 Superoxide Dismutase and Dioxygen Catalysis

 

Discussion Questions on O2 (section1) and SOD (section 2) and Peroxidases (section 3)

 

Week 12 – Apr.3/5

C11.4-C11.5- Dioxygen Carriers & Activation; C11.6-C11.7- Dioxygen Reduction & Activation; C11.8- Dioxygen Reduction & Activation

Discussion Questions on Section 4, Section 5, and Section 6

  Week 13 – Apr. 10/12

C12.1 through C12.2 -Hydrogen and Carbon Metabolism

C12.3 -Nitrogen Metabolism

Discussion Questions on H2 Metabolism; Discussion Questions on C1 Metabolism;

 

  Week 14 – Apr. 17/19

C12.6-C12.7 -Molybdenum and Tungsten Enzymes

C9 Metals and Nucleic Acids

 
  Week 15 – Apr. 24/26 C7 Metals in Medicine everyone does short presentation of one topic